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Meiler Lab Computational Chemical and Structural Biology |
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Steffen Lindert
Former Graduate Student
Ph.D., Vanderbilt University
slindert [ at ] ucsd.edu
Currently:
http://users.mccammon.ucsd.edu/~slindert/
Research Interests:
- Research Projects
- Publications
Lindert, S.;Stewart, P. L., Meiler, J.
Hybrid approaches: applying computational methods in cryo-electron microscopy (2009) Curr Opin Struct Biol
Lindert, S.;Staritzbichler, R.; Woetzel, N.; Karakas, M.; Stewart, P. L.; Meiler, J.
EM-fold: De novo folding of alpha-helical proteins guided by intermediate-resolution electron microscopy density maps (2009) Structure
Nils Woetzel;Steffen Lindert, Phoebe L. Stewart, Jens Meiler
BCL::EM-Fit: Rigid body fitting of atomic structures into density maps using geometric hashing and real space refinement (2011) Journal of Structural Biology
Steffen Lindert;Tommy Hofman, Nils Woetzel, Mert Karakas, Phoebe L. Stewart, Jens Meiler
Ab initio protein modeling into cryoEM density maps using EM-Fold (2012) Biopolymers
Steffen Lindert;Nathan Alexander, Nils Woetzel, Mert Karakas, Phoebe L. Stewart, Jens Meiler
EM-Fold: De Novo Atomic-Detail Protein Structure Determination from Medium-Resolution Density Maps (2012) Structure
Steffen Lindert;Phoebe L. Stewart, Jens Meiler
Computational determination of the orientation of a heat repeat-like domain of DNA-PKcs (2013) Computational Biology and Chemistry
Steffen Lindert;Jens Meiler, J. Andrew McCammon
Iterative Molecular Dynamics Rosetta Protein Structure Refinement Protocol to Improve Model Quality (2013) J Chem Theory & Computation
Hybrid approaches: applying computational methods in cryo-electron microscopy (2009) Curr Opin Struct Biol
Lindert, S.;Staritzbichler, R.; Woetzel, N.; Karakas, M.; Stewart, P. L.; Meiler, J.
EM-fold: De novo folding of alpha-helical proteins guided by intermediate-resolution electron microscopy density maps (2009) Structure
Nils Woetzel;Steffen Lindert, Phoebe L. Stewart, Jens Meiler
BCL::EM-Fit: Rigid body fitting of atomic structures into density maps using geometric hashing and real space refinement (2011) Journal of Structural Biology
Steffen Lindert;Tommy Hofman, Nils Woetzel, Mert Karakas, Phoebe L. Stewart, Jens Meiler
Ab initio protein modeling into cryoEM density maps using EM-Fold (2012) Biopolymers
Steffen Lindert;Nathan Alexander, Nils Woetzel, Mert Karakas, Phoebe L. Stewart, Jens Meiler
EM-Fold: De Novo Atomic-Detail Protein Structure Determination from Medium-Resolution Density Maps (2012) Structure
Steffen Lindert;Phoebe L. Stewart, Jens Meiler
Computational determination of the orientation of a heat repeat-like domain of DNA-PKcs (2013) Computational Biology and Chemistry
Steffen Lindert;Jens Meiler, J. Andrew McCammon
Iterative Molecular Dynamics Rosetta Protein Structure Refinement Protocol to Improve Model Quality (2013) J Chem Theory & Computation